PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.S7L1T
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 133aa    MW: 14754.2 Da    PI: 9.464
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.S7L1TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.88.6e-201851134
         GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                 Cs C+ttkTplWR gp g+k+LCnaCG++yrk++
  Araip.S7L1T 18 CSDCKTTKTPLWRGGPAGPKSLCNACGIRYRKRR 51
                 ********************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004017.9E-161262IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.19E-121451No hitNo description
Gene3DG3DSA:3.30.50.101.4E-151651IPR013088Zinc finger, NHR/GATA-type
PROSITE patternPS0034401843IPR000679Zinc finger, GATA-type
PfamPF003201.0E-171851IPR000679Zinc finger, GATA-type
PROSITE profilePS5011412.4261848IPR000679Zinc finger, GATA-type
CDDcd002028.30E-131869No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MVMMDLNKEW VCESKKCCSD CKTTKTPLWR GGPAGPKSLC NACGIRYRKR RASAVGMRKG  60
QERKRERSQN GGGSSSSTSS SDNELKESLK VNLMALGEEF WLLKKKQRSM CLLGEEEQAA  120
VCLMALSCGY VFA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016207532.19e-93PREDICTED: GATA transcription factor 16
SwissprotQ9FJ102e-32GAT16_ARATH; GATA transcription factor 16
TrEMBLG7KWI07e-45G7KWI0_MEDTR; GATA type zinc finger transcription factor family protein
STRINGVIT_14s0060g01520.t019e-42(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15693298
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.16e-23GATA transcription factor 16